Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MPKTLTEKLNAIKATGKGIFVPYIMAGDHEKGLDGLGETIHFLEDLGVSAIEVGIPFSDPVADGPVIEEAGLRSLAHGTSTQALVETLKTI--ETEIPLVIMTYFNPLFQYGVENFVKDLADTAVKGLIIPDLPHEHANFVEPFLADTDIALIPLVSLTTGIERQKELIEGAEGFVYAVAINGVTGKSGNYRADLDKHLAQLHQVADIPVLTGFGVSSQADLERFN-AVSDGVIVGSKIVKALHQGEPIQDFIRQAVAYQK 1RD5 Chain:A ((2-240)) -SRPVSDTMAALMAKGKTAFIPYITAGDPD--LATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIM----FRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEA---------------

General information: TITO was launched using: RESULT: Template: 1RD5.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1298 -100664 -77.55 -426.54 target 2D structure prediction score : 0.76 Monomeric hydrophicity matching model chain A : 0.81 3D Compatibility (PKB) : -77.55 2D Compatibility (Sec. Struct. Predict.) : 0.76 1D Compatibility (Hydrophobicity) : 0.81 QMean score : 0.684

(partial model without unconserved sides chains): PDB file : Tito_1RD5.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1RD5-query.scw PDB file : Tito_Scwrl_1RD5.pdb: