Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKILTMKKVTKTFGSGHTKVSALKAIDFYVKEGEFVSIIGPSGSGKSTFLTISGGLQTPTSGEIVINGHSLTELPEKKRADLRFKEIGFILQSSNLIPFLTVKEQFELVDQVTSKKEDSTKIDSLLQSLDIQSLKNSYPK-------DLSGGERQRVAIARALYNEPSLILADEPTASLDTDHAYEVVKLLVKEAHEKQKATIMVTHDVRMIQWSDRVYRMEDGYLTEEEKKKE
5L22 Chain:A ((345-545))-------------------KTPVLRNINMRILPGEFVAIIGPSGSGKSSLVRTILGIWLPVHGTVEIDGADLKQWDR----DYFGKFVGYLPQDIELFEG-TVAENIARFGELDSEKIIEAAKLSGAHDVIIK-LPDGYDTYIGPGGITLSGGQRQRIALARALYGNPRIVILDEPDSNLDEQGEQALYNALI-ELKKRKVTTIIVSHRIRLLNLVDKIAIMQDGTL--------


General information:
TITO was launched using:
RESULT:

Template: 5L22.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 913 -25984 -28.46 -133.94
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -28.46
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.454

(partial model without unconserved sides chains):
PDB file : Tito_5L22.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5L22-query.scw
PDB file : Tito_Scwrl_5L22.pdb: