Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDKYEILAQIGDGTFGSVAKAVSKKTGQLVAIKKMKQKFYTWEECV---KLPEVDVVRRIHGHPNVVKLREVIRENNELFFVFEYMDGDLLGVIKKAKQQGGPPASTPSAAPLIPYPLVKNYMRQMLQALVYIHKRGYFHRDMKPENLLIRKEASGDEVLKLADFGLVKEICA-RPPFTDYVSTRWYRAPELLLQDRFYGAAVDVWAAGCIMAELITMRPLFPGTNEVDQLFKIMSVLGSPTEEVWAGGLRLAKKIRYTFPKVAGSGLAQALPSHIPL--PALDLLRQMLVYDPKVRLTAEQCLQHPFFNVGIDECNAPSAAALDQLALMAKRMLPGSKTAPPALKSPTAGQVAALKAARASTDASLSDTSSRKFYLLGTLKDPAPSLPKLPVALSTSPPSLDAPPNASSPLRGRGALSPAGMPVLANGHQCPSLTTTVAKGKRRSQETADTSLAKKLAGLKNVPTGKGKLPVSYALPAASAVHSPRAAPNLKVSASVARPYPLAPTANNRDAVASPRHHNPYKEAETTSPTAASAAAKVEIDLDELMEEFASEMTAMGVLAQRHDSGASAESKSESYVSQPALPPDPVATLLNNSRYRRKSTTSADPLLKGNNSPRATHQLDTRKVDDVAAKSDLPRIDHSAPKGMSPSLKALLAKHKTSGLAFP
1F5Q Chain:A ((1-287))MENFQKVEK--EGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG------------IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP-DYKPSFPKWARQDFSKVVP---PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1F5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1335 -45918 -34.40 -164.58
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -34.40
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.482

(partial model without unconserved sides chains):
PDB file : Tito_1F5Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1F5Q-query.scw
PDB file : Tito_Scwrl_1F5Q.pdb: