Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MLKEIKRRNRMKNKRLIGIIAALAVLVAGSLIYSSMNKSEAQNNKDEKKITKIGVLQFV-SHPSLDLIYKGIQDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLVANGNDLVVGIATPAAQGLASA-TKDLPVIMAAITDPIGANLVKDLKKPGGNVTGVSDHNPAQQQVELIKALTPNVKTIGALYSSSE--DNSKTQVEEFKAYAEKAGLTVETFAVPSTNEIASTVTVMT---SKVDAIWVPIDNTIASGFPTVVSSNQ--SSKKPIYPSATAMVE---VGGLASVVIDQHDLGVATGKMIVQVLKGAKPADTPVNVFSIGKSVINKKIAQELGITIPESVLKEAGQVIE 3JY6 Chain:D ((8-256)) --------------------------------------------------KLIAVIVANIDDYFSTELFKGISSILESRGY---I--GVLFDANADIEREKTLLRAIGSRGFDGLILQSFSNPQTVQEILHQQMPVVSVDREMDAC----------PWPQVVTDNFEAAKAATTAFRQQ--GYQHVVVLTSELELSRTRQERYRGILAAAQDVDVLEVSESSY-HSEVHQRLTQLITQNDQKTVAFALKERWLLEFFPNLIISGLIDNQTVTATGFADTDFIRRMEPKLTLITQNPFLMGASSAEIMLRQLAGEKV----------------------------------------

General information: TITO was launched using: RESULT: Template: 3JY6.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1218 2701 2.22 11.44 target 2D structure prediction score : 0.58 Monomeric hydrophicity matching model chain D : 0.62 3D Compatibility (PKB) : 2.22 2D Compatibility (Sec. Struct. Predict.) : 0.58 1D Compatibility (Hydrophobicity) : 0.62 QMean score : 0.408

(partial model without unconserved sides chains): PDB file : Tito_3JY6.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3JY6-query.scw PDB file : Tito_Scwrl_3JY6.pdb: