Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MTAQMKTNASAKKAVNSPNHIYDTFIVGAGISGIAAAIRLDQVGYTNYKIIEKAGRVGGTWRENTYPGCGCDVPSALYSYSFAPSA----KWGHLFARQPEILSYLEDVSNEFNITSKIEFYNELLNAAWDESRHLWVLDTTTGQYL-SRTVIFATGPITEAQIPRLEGLDTFTGEMFHSAKWNHD-YDLTGKRIAVIGTGASAIQFVPQIQPKAKELFVFQRTAPWVLPKPDTDLG-ELSKSIIAKY---------------------PAIQAS-----------WRKSVALTLNAINFGLRNPLALKPVNVLGKQLLKLQIADPELRKNVTP-NFDIGCKRILFANNYYP-----------ALQAPNTTLIPHGLVKVEGNTVIAANGERHEVDVIIWGTGFEVSHPPIGKRVFNEKGQ-RLNDLWKNSSPEAYLGTNIENVPNAFLVLGP-NVLVYDSFIGLAEAQLDYIVDGLLKIKNKGISKLNVKADVIKKHNDLVQKHLQTTVFNS--GGCKSYYLDAN----GRNFAAWPWSLKKLKQRLKKLDLKDYEVTYQMSKTH 2YM2 Chain:A ((13-537)) -----------------PPEEVDVLVVGAGFSGLYALYRLRELGRSVH-VIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPN-PGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPKGYPFGTKKLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRTSE---------REYELDSLVLATGFDALTGALFKIDIRGVGNVALKEKWA-AGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMFKNGLTRSEA---VLEKEDEWVE-HVNEIADETLYPMTASWYTGANVPGKPRVFMLYVGGFHRYRQICDEVAAKGYE---------

General information: TITO was launched using: RESULT: Template: 2YM2.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2571 23410 9.11 50.34 target 2D structure prediction score : 0.63 Monomeric hydrophicity matching model chain A : 0.77 3D Compatibility (PKB) : 9.11 2D Compatibility (Sec. Struct. Predict.) : 0.63 1D Compatibility (Hydrophobicity) : 0.77 QMean score : 0.458

(partial model without unconserved sides chains): PDB file : Tito_2YM2.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2YM2-query.scw PDB file : Tito_Scwrl_2YM2.pdb: