Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNFKFSLAWQILIALILGIVVGAVLHNQPEIKDSIVNNVLTPLGKIFISLIKMIVIPIVFSTLILGIAGVGSTKSLGRLGFKTILYFEIITTIAILVGLFAANIFHPGSGIDMSQLVQTDISQYKHTTEEVQSQSHGIIQTILSLIPTNIISSMAHGEMLPVIFFAVLFGIGLSSLPAT-------TKDPLLNVFHAVSETMFRVTHIIMKYAPVGVFGLIAVTVANFGFASLIPLGKLVVLVYGAILFFALVVLGITAKMFSINIFTLFKILKDELILAYSTASSETVLPRIMQKMEAYGAPKAISSFVIPTGYSFNLDGSTLYQSIAAIFIAQLYGIEMSISQQVILVVTLMITSKGIAGVPGVSFVVLLATLGSVGIPV------EGLAFIAGVDRIMDMARTALNVVGNALAVLVISKWEKQYDYEKAAAYEASLK
4P19 Chain:A ((7-416))--YIEYPVLQKILIGLILGAIVGLILGHYGYAHA--VHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASI-SPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQ----QFQ------PHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE----------------


General information:
TITO was launched using:
RESULT:

Template: 4P19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1985 -321584 -162.01 -810.03
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : -162.01
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.420

(partial model without unconserved sides chains):
PDB file : Tito_4P19.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P19-query.scw
PDB file : Tito_Scwrl_4P19.pdb: