Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAQELLAQLQAGTAKFSDVLAYIEARYQHTPTAFQNGAQHNAATENQGSAKVFSFAKLQGLDQAQTLILFAEHYASVLAPPEGTDHQNIRQFMQNGWDGVKFEGQALTEK
5LC5 Chain:S ((23-49))-------------------------------------------------------------------------------CQRSPGSQGVRDFIEKRYVELKKANPD----


General information:
TITO was launched using:
RESULT:

Template: 5LC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain S - contact count / total energy / energy per contact / energy per residue : 14 -1924 -137.39 -71.24
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain S : 0.58

3D Compatibility (PKB) : -137.39
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.314

(partial model without unconserved sides chains):
PDB file : Tito_5LC5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LC5-query.scw
PDB file : Tito_Scwrl_5LC5.pdb: