Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPRTFPCPRCGEPSVWEGNEFRPFCSERCKLIDLGAWANDEYRLPTQDAPQQDKGSQHEDDYED
5IYB Chain:J ((1-21))MIIPVRCFTCGKIVG---NKWEAY----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IYB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 28 -901 -32.16 -42.88
target 2D structure prediction score : 0.90
Monomeric hydrophicity matching model chain J : 0.70

3D Compatibility (PKB) : -32.16
2D Compatibility (Sec. Struct. Predict.) : 0.90
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.853

(partial model without unconserved sides chains):
PDB file : Tito_5IYB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IYB-query.scw
PDB file : Tito_Scwrl_5IYB.pdb: