Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLYYSPGACSLAAHIILNEINVDFDLERVNLKTHKTEKGADYYEINPKGYVPALEINPGLILTENVAILPFLAQHDPKQDLIPPSG-LGRAKVLEWLGYLNSELHDAYAVFFGAPLTNDEKTKAYAEIDRLLKYIDNYLAESDYDYLVNDNFGPADAYLFVLTNWSNSIEHDLTPYKHIIALRNKVAERQSVQIAMRDEGLIS
2PVQ Chain:A ((1-200))MKLYYKVGAASLAPHIILSEAGLPYELEAVDLKAKKTADGGDYFAVNPRGAVPALEVKPGTVITQNAAILQYIGDHSDVAAFKPAYGSIERARLQEALGFC-SDLHAAFSGLFAPNLSEEARAGVIANINRRLGQLEAMLSDKN-AYWLGDDFTQPDAYASVIIGWGVGQKLDLSAYPKALKLRERVLARPNVQKAFKEEGL--


General information:
TITO was launched using:
RESULT:

Template: 2PVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 900 -72512 -80.57 -364.38
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -80.57
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.579

(partial model without unconserved sides chains):
PDB file : Tito_2PVQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PVQ-query.scw
PDB file : Tito_Scwrl_2PVQ.pdb: