Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNQNARPHIEKILANLTQLPGVYKMLGKEGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARI----YDIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSADKPYPRIASGRGKGKHQIGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYFSQRKRPCLQYQIKRCSAPCVGLVSPEDYKEDVNNSIRFLQGDTKELNQELIAKMEQAAADLEFEKAVFYRDRLSLLREVQAQQAVFKVKGEADILAITYQAGVTCVQIMHVRNGRMLGGKSYFPDMLGDDLGQMLSDFMANFYFQVADEVPSELIVNTALPDRKELEEALAQQFGKKVQIKSSVRETRAEWLELAEMNVQHAIKGQLSNHLELNERFHQLEQVVGRPIDRIECFDISHTMGEAPIASCVVFDQGGARKRDYRQFAIQDITAGDDYAAMRQALTRRYKKAMLPDLLLIDGGKGQLHMAMEVMQELGLEAFMVGVSKGEGRKPGLETLHFTDGTKIQLPEDSKALHLIQQVRDEAHRFAITKHRAKRDKRRSTSVLEAIPGLGPKRRRDLLTHFGGIQGVLKASEKELTVVPGLGEVMARTIYKILHE
1YD3 Chain:A ((16-90))-------------------PGVY-IFKNKGVPIYIGKAKRLSNRLRSFL-----NPQTEK-VFRIGEEADELETIVVMNEREAFILEANLIKKYRPKYNVR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1YD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 230 -21578 -93.82 -303.91
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -93.82
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.655

(partial model without unconserved sides chains):
PDB file : Tito_1YD3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YD3-query.scw
PDB file : Tito_Scwrl_1YD3.pdb: