Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMINKKPRIPSPVQIPEHLSFLQGFRDYLVAQTVSPHTRNAYLSDLIQCSEIHKKNRLPDWTSDDISDVLIELTK-VGKSPRSIARCLSALRQFYKSLREQKLRSDNPVATHHSPKIGRALPKDLSEEDVEALIQAPDITTALGLRDRAMFEVLYACGLRVSELLNLRLELINLKQGYLRI-TGKGNKERLVPLGQYACDWVERYLNEARPQLYKSSTDYLFLTQHGGIMSRQNFWYAIKRYALQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQVRMQQLHEKHHPRG
5HXY Chain:B ((38-316))---------------ETNEYLSRFVEYMTGERKSRYTIKEYRFLVDQFLSFMNK-KPDEITPMDIERYKNFLAVKKRYSKTSQYLAIKAVKLFYKALDLR-----VPINLT-PP--PSHMPVYLSEDEAKRLIEAASS----DTRMYAIVSVLAYTGVRVGELCNLKISDVDLQESIINVRS---DKDRIVIMAEECVKALGSYLDLRLSM--DTDNDYLFVSNRRVRFDTSTIERMIRDLGKKAGIQKKVTPHVLRHTFATSVLRNGGDIRFIQQILGHASVATTQIYTHLNDSALREMYTQHRPR-


General information:
TITO was launched using:
RESULT:

Template: 5HXY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1056 -30204 -28.60 -111.04
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -28.60
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.603

(partial model without unconserved sides chains):
PDB file : Tito_5HXY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HXY-query.scw
PDB file : Tito_Scwrl_5HXY.pdb: