Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAEEHALTSPEYIKHHLTNMTYGKMPDGTWKLAETAEEAHSMGFTAIHLDSMGWSIGLGVIFCLLFWIVARAANAGVPTKFQSAIEMIIEFVDSSVRDTFHGKSRLIAPLALTIFVWIFLMNLMDLIPVDWIPQVAAFVGA-NAFGMDPHHVYFKIVPSTDPNITLGMSLSVFVLILFYSIREKGVGGFVGELALNPFNPSNPVAKALLIPVNLILELVTFLARPISLALRLFGNMYAGELIFILI-----ALLPF-----WIQWALSVPWAIFHILVITLQAFIFMMLTIVYLSMASEKH
5FIL Chain:W ((78-222))------------------------------------------------------------------------------------------------------------------------------------------FIGSTNLLGLLPH----SFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFL---PQGTPTP-----LIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMSISTTTALITFTILILLTILEFAVAMIQAYVFTLLVSLYL-------


General information:
TITO was launched using:
RESULT:

Template: 5FIL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain W - contact count / total energy / energy per contact / energy per residue : 398 -71746 -180.27 -535.41
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain W : 0.61

3D Compatibility (PKB) : -180.27
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.308

(partial model without unconserved sides chains):
PDB file : Tito_5FIL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FIL-query.scw
PDB file : Tito_Scwrl_5FIL.pdb: