Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MRKILGIASLIMSTGVVHAEQLNEQEQISPYSVNVTFASQYISRGFQQTWGKPALQIGLDYANPNGLFVGT-WASNVSSNYLRDASVEWDFYAGYLKTIDKFSIGMSVY-YYYYPGAKSTP-ETGSTNYNYGEIVPQIGYGPLSLKYFITYTPDYAGYNSNTMGGPEGKRSRGTTYLDLNFTQPINESWTFGAHYGYERIKNFSEANFQDMKVELIKDLGDGWTTGLAYTKAWDKDGYYRNYSNGESDAPISNPIDSTFTVSVKKVF
4HFS Chain:A ((10-212))ASELPNGIGGRVYLNSTGAVFTAKIV---LPETVKNNDSVSTPYIYSGFRAT-SGTEADIGLQYSKQYNVWKPLMKVGSKNEETYIEGKDKFTYNKGFRP-------GSTVQMTIYKNLSGNTRMTLWGTNND--------------------------GYTGRIITEIQGTNIGTISKWKTLATAAVSY------ESQRDAIKATFSTSFNNITI----------------------DNKAVTPVVDTQDFAKVSVAGNNVTISVNK--


General information:
TITO was launched using:
RESULT:

Template: 4HFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1158 61363 52.99 311.49
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 52.99
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.121

(partial model without unconserved sides chains):
PDB file : Tito_4HFS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HFS-query.scw
PDB file : Tito_Scwrl_4HFS.pdb: