Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKKGMINRELKREKTVAKYAVKRAELKATIANVNASDEERFEAMLKLQALPRNASPVRLRNRCGLTGRPHGYFRKFGLSRNKLRDTVMQGDVPGVVKASW
5AJ3 Chain:N ((36-128))--------RDVKRRKMAYEYADERLRINSLRKNTILPKDLQEVADEEIASLPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHLADHGQLSGVQRAMW


General information:
TITO was launched using:
RESULT:

Template: 5AJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain N - contact count / total energy / energy per contact / energy per residue : 228 -9837 -43.14 -105.77
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain N : 0.76

3D Compatibility (PKB) : -43.14
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.568

(partial model without unconserved sides chains):
PDB file : Tito_5AJ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AJ3-query.scw
PDB file : Tito_Scwrl_5AJ3.pdb: