Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNIYQFEAELLVGDIKQFADYKGKVLLIVNTASKCGFTP-QFAGLEKLYEKYKDLGLEVLGFPCNQFGGQDPGSNKEIGTFCQRNYGVKFPMFAKVDVKGPEAHVIFRYLTRE--AKGILGSSTIKWNFTKFLVGKDGSVLNRYAPTTKPEALEADIEKALAS
5H5S Chain:A ((12-165))--SMHEFSAKDIDGHMVNLDKYRGFVSIVTNVASQ-GKTEVNYTQLVDLHARYAERGLRILAFPSNQFGKQEPGSNEEIKEFAA-GYNVKFDMFSKIEVNGDDAHPLWKWMKIQPKGKGILGNA-IKWNFTKFLIDKNGVVVKRYGPMEEPLVIEKDL------


General information:
TITO was launched using:
RESULT:

Template: 5H5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 771 -3631 -4.71 -24.20
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -4.71
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.546

(partial model without unconserved sides chains):
PDB file : Tito_5H5S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5H5S-query.scw
PDB file : Tito_Scwrl_5H5S.pdb: