Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIFSLIAFAVCLSLQGCMQHESIAHEHRPHDRGTLVSQTHNFYQISNDVFRSEQPDAAMIPELKHHQIGTIINLRAKASDDLVFKNENFNLIHIPI--NTWAIDRQDLLEVMQQIQLAKQNNQRVLLHCYHGSDRTGASVSMYRIIFENWVIDDAVKEMKQGGYGYHIIWKNIDRLFTPENVKWIQQQLSNPS
3CM3 Chain:A ((34-129))--------------------------------------------RVTNNVYLGNYKNAMDAPS-SEVKFKYVLNL---TMDKYTLPNSNINIIHIPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAY--------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3CM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 418 -42091 -100.70 -447.78
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -100.70
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_3CM3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CM3-query.scw
PDB file : Tito_Scwrl_3CM3.pdb: