Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAEFIAVILITILAVISPGADFA-IVTKNSYLYGRKIGVFTSLGISLGVLVHVTYTLVAVAFVMTYTPQILNIVKYIGALYLIYIGYKTFTQKPVLETTALTAIGTFQAIKYGFFTNALNPKTTLFVISTYTQIVSLTTPKSILLAYGFFMSFAHFVWFSLVAVLFSSMLLRQKMLAKQVQINRVIGSILCVLGVILLFTKFQ
5BN3 Chain:A ((373-441))--------LTIIGAVSPPGGDFSEPVTQNTL---RLVGALWALDSKLAYKRHYP----AINYLISYTKQWEFVKKYFEELY--------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5BN3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 130 -12628 -97.14 -194.28
target 2D structure prediction score : 0.31
Monomeric hydrophicity matching model chain A : 0.48

3D Compatibility (PKB) : -97.14
2D Compatibility (Sec. Struct. Predict.) : 0.31
1D Compatibility (Hydrophobicity) : 0.48
QMean score : 0.135

(partial model without unconserved sides chains):
PDB file : Tito_5BN3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BN3-query.scw
PDB file : Tito_Scwrl_5BN3.pdb: