Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMQMKKKFITGGIVVAFLCLIGYTGTRYANEIILWGGETDIDTINENLTQLDHTLTDKEQAITDLTARLAQKEQTLQDSKADVQEYQTKVNELENQKNQSAAEKQNLESQLVSKDAQLQSKQNEINVKLDEINQKNDEINHLNADWTARLQEAQAKLSELQNTVNGLNQQIATLTQEKTNVETQLTDTQKKLDEATA---ENSSLKQYIQKLEKAKDEVEDTADKSQQIVEEHLRK
5C1F Chain:A ((10-92))---------------------------------------------------------------------------------------------------------------------------------------------NYFWGANDEGYHALLSRFSD-VKHINEELRSFYHERANIEEDYAKRMAKLSRTTFSSLETGCLKESVQVM---KAEVDNMAKSHLQI-------


General information:
TITO was launched using:
RESULT:

Template: 5C1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 75 935 12.47 11.69
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 12.47
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.367

(partial model without unconserved sides chains):
PDB file : Tito_5C1F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C1F-query.scw
PDB file : Tito_Scwrl_5C1F.pdb: