Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERLQRVGVRTGPTFADAPASTSELPKPTFQPGSSIYEMDSSGRLHRFQCGRVLGRGGFAKCYEVSD--ETGTYALKAVNRASLEKPKTLQKLHSEISIHRRMKHKHVVEFLRTFRDRYYVYMLLEKCDHGTLMDLLKVRR-FSVAETQYVMLQCLSALQYMHSECVIHRDLKPGNIMLDRELNVKIGDFGLAAELQYDGERKRTICGTPNYIAPEIIDHKSHGHSYEVDTWSLGVILYTLLVGQPPFQMEDVESTYKRIRQCRYDFPASVPDNARDLITQILQSSPAHRPTLMDIRQHSFFSSSPPPPLTPPASFASFGLPVPGAAAPATTATASAAAATTITRSARRGPAVDMHHPPPAPYGKELLGAPAQREVLRPINANVPPPPGAPTSPRHLANLRQQQQPTPAPTLPGTCARARSDTPRSAPATAAVPLSGRCPASSPQQLRNDDNADEDEKQQLTALHDRLHQTLCGDAAADDAADNEAPPPPVWVTQCADFSSKYGMAYRLSTGQTGAHFNDSTKIVWEPITDRVEYYARVKIEMPARDGGTGLFAKDERHVFSMHSYPPELEKKVTLTKYFKTYLGRVQSSPDRVPVVACSPFLPAAPPRCTDPHTSSDFVYVKRWLRVDGALVFRLSNKTVQVCFEDGAEIILSSEWRVVTYTTPSGRRRTMPLNSVATEWEEAAERLRNTKSVLYQVIRDHCL
5TA8 Chain:A ((72-328))-----------------------------------------------------LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5TA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1274 -7161 -5.62 -28.19
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -5.62
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_5TA8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TA8-query.scw
PDB file : Tito_Scwrl_5TA8.pdb: