Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
3AYW Chain:D ((34-129))------------------------------KRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK


General information:
TITO was launched using:
RESULT:

Template: 3AYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 183 -24237 -132.44 -252.47
target 2D structure prediction score : 0.82
Monomeric hydrophicity matching model chain D : 0.93

3D Compatibility (PKB) : -132.44
2D Compatibility (Sec. Struct. Predict.) : 0.82
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_3AYW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AYW-query.scw
PDB file : Tito_Scwrl_3AYW.pdb: