Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGNTSSERAALERHGGHKTPRRDSSGGTKDGDRPKILMDSPEDADLFHSEEIKAPEKEEFLAWQHDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNWSKLPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVSELSSSPPGPYHQEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDGVMVLSATHRYKKKYVTTLLYKPI
5UFU Chain:B ((11-204))----------------------------------------------------------------------------ARPTVFRWTGGGKEVYLSGSFNNWSKLPLTRDQNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKC---------------------------KAPPILPPHLLQVILN--------PALLPEPNHVMLNHLYALSIKDGVMVLSATHRYKKKYVTTLLYKPI


General information:
TITO was launched using:
RESULT:

Template: 5UFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 526 -53872 -102.42 -338.82
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.84

3D Compatibility (PKB) : -102.42
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_5UFU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5UFU-query.scw
PDB file : Tito_Scwrl_5UFU.pdb: