Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKSSILFIFILLLCIGLQYETIYYTDGSRSGAEYGLMGVSIF-LALFYMIPALYFLFRIGKKWELPKKVLILSLLGGMFLSGWLSSFANTYIHDLLGVLFPDSPFLNAFESAIVAPLVEEPLKLLPLVFVLALIPVRKLKFLFLLGIASGLGFQMIEDIGYIRTDLPEGFDFTISRILERIISGIASHWTFSGLAVVGVYLLYRAYKGQKVGKKQGLIV
4M5B Chain:A ((105-154))------------------------------------ALGANSFNMAFIAPFVGYGIYRLMLSL---KLNKVLSSAIGG-YVGINAAALAT----------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4M5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 115 -8220 -71.48 -167.76
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.45

3D Compatibility (PKB) : -71.48
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.45
QMean score : 0.320

(partial model without unconserved sides chains):
PDB file : Tito_4M5B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M5B-query.scw
PDB file : Tito_Scwrl_4M5B.pdb: