Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSLTGVSNPTTDSARLVLAEANKAFADDSLTEQGLRDILQTVKDAIASLESIKESQSATKDGGQTAGKETAGEDESANQTQEISQGIK
4Y99 Chain:B ((27-65))---------------KKILAERRKVLAIDHLNEDQLREKAKELWQTIYNLEAEK-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4Y99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 20 -1061 -53.03 -27.19
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : -53.03
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.647

(partial model without unconserved sides chains):
PDB file : Tito_4Y99.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Y99-query.scw
PDB file : Tito_Scwrl_4Y99.pdb: