Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MFVWYNLFLKKEREVISMRKWTKGFLIFGVVTTVIGFILLFVGIQSDGIKSLLSMSKEPVYDSRTEKLTFGKEVENLEITLHQHTLTITDSFDDQIHISYHPSLSAHHDLITNQNDRTLSLTDKKLSETPFLSSGIGGILHIASSYSSRFEEVILRLPKGRTLKGINISANRGQTTII-NASLENATLNT-NSYILRIEGSRIKNSKLT--TPNIVNIFDTVLTDSQLE-STENHFHAENIQVHGKVELTAKDYLRIILDQKESQRINWDISSNYGSIFQFTREKPESRGTELSNPYKTEKTDVKDQLIARSDDNIDLISTPSRR 4YGU Chain:D ((6-160)) ---------------------------------------------------------------ESEVRKV-DAFSSIEITS-VGTIHFTQSDTYSFRIE--GREKYVKNTETTVKDGRLLIGFKDKKN---KS--------------KDGVTIWISAPD---LKEVEFT-GVGEFNCEKPLKLDEVSFEVKGVGEVNVADLTCNVLKVALRGVGSADI-HVVCDYLSAQMGGVGSVTLSG-------------------------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 4YGU.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 798 -28719 -35.99 -196.70 target 2D structure prediction score : 0.45 Monomeric hydrophicity matching model chain D : 0.56 3D Compatibility (PKB) : -35.99 2D Compatibility (Sec. Struct. Predict.) : 0.45 1D Compatibility (Hydrophobicity) : 0.56 QMean score : 0.328

(partial model without unconserved sides chains): PDB file : Tito_4YGU.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4YGU-query.scw PDB file : Tito_Scwrl_4YGU.pdb: