Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFYSIKELVEQADLDFQGNVAELMITTEFELTGREREEVFLLMERNLEVMKASVQLGLNENKSRSGLTGGDAAKLDHYIENGKTLSDYTILSAARNAIAVNEHNAKMGLVCATPTAGSAGCLPSVLTAAIEKLDLSHEQQLDFLFAAGAFGLVIANNASISGAEGGCQAEVGSA-SAMSAAALTLAAGGTPYQASQAIAFVIKNMLGLIC-DPVAGLVEVPCVKRNAMGASFAFIAADMALAGIESKIPVDEVIDAMYQVGASMPTAFRETAEGGLATTPTGRRLQKEIFGE
2HP0 Chain:B ((123-242))-----------------------------------------------------------------------------------------------------------------------SLVPAIF-AVGEHVGANGHNCLKSYVLGIEVVATLGRAVGKGHYLAGWH-PTSTLGVFGATTAAALLLGADEEQLRNAWGIAASNSCGIIKNFGTM-----TKPMHTGSAARNGVLSAWLSMQSFT-----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2HP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 530 -66657 -125.77 -569.72
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : -125.77
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.392

(partial model without unconserved sides chains):
PDB file : Tito_2HP0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HP0-query.scw
PDB file : Tito_Scwrl_2HP0.pdb: