Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKLEVKDNKKLVLKSVICKKLHDTKVEDVDQEINRFHQHLQLLKAQIFGPLIVKSCGTTIHDDGLITTDFEFYIQAHNAQQYSNIYDVQDSISVPYCLYVRFEDSPEYLQYAYSKLDLYVYENDIQTDGIVYTVYVNSSPEKMVVDIFIPIVSL
4AVX Chain:A ((47-83))--------------------------VNSIKKKVNDKNPHVALYALEVMES-VVKNCGQTVHDE-------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4AVX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 65 -9499 -146.14 -256.73
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -146.14
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_4AVX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AVX-query.scw
PDB file : Tito_Scwrl_4AVX.pdb: