Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIRKLIIFLLMLPLFVLWLELHVLVNNLLLNLESPLDFVISMSLAFFVLILSKIVLDILYALKDLYKKEALITIFPFIFIRRKKVNVRFSPYFSFHRKSLSPDDLRSRIIWSFILEIAIILVFILKIPFAIIMLTTIFFWTIMDINHLVFNKTEFLFNQSKWEKEDSFESDLTNTLKDKIQKSELSYSDLMSLQLYDAMNQSTFLTDSELFEDILKKIEDSHNTLLCTGLVELLLYEMSISNNNNWSNKVDKIRIHLIRINQLDFFYYTSWLRQNFDFCMNREYHKMKSRKLLLSNKKIV
5BQO Chain:E ((162-179))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DKKERFLNLYNQLLKIRK--------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5BQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 4 -587 -146.75 -32.61
target 2D structure prediction score : 0.22
Monomeric hydrophicity matching model chain E : 0.43

3D Compatibility (PKB) : -146.75
2D Compatibility (Sec. Struct. Predict.) : 0.22
1D Compatibility (Hydrophobicity) : 0.43
QMean score : 0.285

(partial model without unconserved sides chains):
PDB file : Tito_5BQO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BQO-query.scw
PDB file : Tito_Scwrl_5BQO.pdb: