Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKSILTTLLFAVLYFLCMGIGVLLGNLFDQTGNMFYAPAFTALVGGSVYMILVAKVPRFGAITTIGLVIALFFLGTKHGAGSFLPGIICGLLADGVAHLGKYKDKTKNFLSFIIFAFSTTGPILLMWIAPKAYMATLLARGKSQEYIDRIMVAPNPGTVLLFIASIVIGALVGALIGQALSKKFAQKI
4Z7F Chain:F ((29-62))--KSIALMGVLIAVVVVFSRF------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4Z7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 5 -1517 -303.30 -79.82
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain F : 0.41

3D Compatibility (PKB) : -303.30
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.41
QMean score : 0.299

(partial model without unconserved sides chains):
PDB file : Tito_4Z7F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Z7F-query.scw
PDB file : Tito_Scwrl_4Z7F.pdb: