Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLEAVHTEKQWERSATELPPFIIKRLPVRLTFDNNYFNDRYQVIPIGGYNVIIENILKD--VEVGLGVDCFDYREELE--ASANKVAFTGMIDQYFDYKHGELEYRSLRFKHEVLDEENHQGNAVVNYTDREIPYTRIIEHKKF----EYGLQPKTVITHEYPADWKRGDEPYYPINDEKNNAIFSKYHEEA---SQNDKVIFCGRLADYKY
4RPL Chain:B ((161-366))-----YTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAADHRIEVRLNTDWFDVRGQLRPGSPAAPVVYTGPLDRYFDYAEGRLGWRTLDFEVEVLPIGDFQGTAVMNYNDLDVPYTRIHEFRHFHPERDYRTD-KTVIMREYSRFAEDDDEPYYPINTEADRALLATYRARAKSETASSKVLFGGRLGTYQY


General information:
TITO was launched using:
RESULT:

Template: 4RPL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 543 13646 25.13 69.98
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : 25.13
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.383

(partial model without unconserved sides chains):
PDB file : Tito_4RPL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RPL-query.scw
PDB file : Tito_Scwrl_4RPL.pdb: