Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLEIKNLTG----GYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLAPYSGSININGLTL----QGDATSYRKQIGYIPETPSLYEELTLREHIETVAMAYGIEQKVAFE---RVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPFLGLDPLAISDLIQLL-EVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFDMPEASLNDIYLALTKEEDL
3TUZ Chain:C ((24-272))MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNL---LSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDT---VSEVFSHPKTPLAQKFIQSTLHLDI


General information:
TITO was launched using:
RESULT:

Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1247 -7837 -6.28 -33.07
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain C : 0.77

3D Compatibility (PKB) : -6.28
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.443

(partial model without unconserved sides chains):
PDB file : Tito_3TUZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TUZ-query.scw
PDB file : Tito_Scwrl_3TUZ.pdb: