Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKMERNINMKKWQTCVLGAGSLLCLTACSGKSVTSEHQTKDEMKTEQTASKTSAAKGKEVADFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKELS
2H1B Chain:A ((2-129))--------------------------------------------------------EGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKQFPYMANQYKHFKSQGVEIVAVNVG----ESKIAVHNFMKSYGV-NFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMI--------


General information:
TITO was launched using:
RESULT:

Template: 2H1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 600 -81906 -136.51 -639.89
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -136.51
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.682

(partial model without unconserved sides chains):
PDB file : Tito_2H1B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2H1B-query.scw
PDB file : Tito_Scwrl_2H1B.pdb: