Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASKDFHVVAETGIHARPATLLVQTASKFASDITLEYKGKSVNLKSIMGVMSLGVGQGADVTISAEGADADDAIAAISETMEKEGLA
3OQM Chain:S ((1-85))-AQKTFKVTADSGIHARPATVLVQTASKYDADVNLEYNGKTVNLKSIMGVMSLGIAKGAEITISASGADENDALNALEETMKSEGL-


General information:
TITO was launched using:
RESULT:

Template: 3OQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain S - contact count / total energy / energy per contact / energy per residue : 403 -53179 -131.96 -625.64
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain S : 0.93

3D Compatibility (PKB) : -131.96
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.734

(partial model without unconserved sides chains):
PDB file : Tito_3OQM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OQM-query.scw
PDB file : Tito_Scwrl_3OQM.pdb: