Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKQLPKISTTSKALAKSLLLAQGVLDQAKKYSTLPFTQTHIILPRIDEKYYSWTHYGIFFPLLPEPHRYLNIMILIGTPGALAFDHDDIITGNPRKTATFFSSTAALEQALLKAYIIPEDTKINKDGTLIELGQEISIQGKFPHIHINGHYDGFDFDFDIDITSHVSWFIKTPIYDHFSLLAKFKGFLNYQAKHIETQGLCTYEYARAVGPHSITNKLIPDAYKLPLDFFTYQIINLNEATQLLLTKAD-IAGQTAAYTLHIRHLDQPAEIYTDVSFDIISHQVDDFVSPSGQKMRLPKYFSWIARNDAKQIILNIQAEIDCPFRYGHGRGYASSYIFTGHYFGNEVQGRGYIEYVDIENPQAFEDE
3OII Chain:B ((93-126))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THQCLLTLLDSPINKAGKLQVYIQTSRGI---------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3OII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 32 966 30.19 34.50
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain B : 0.50

3D Compatibility (PKB) : 30.19
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.297

(partial model without unconserved sides chains):
PDB file : Tito_3OII.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OII-query.scw
PDB file : Tito_Scwrl_3OII.pdb: