Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDNSKRPINQIIARINDAAKHGEALVLTAEEVKILSKDIGDK----------VFIPVLTNEQVVQLVKEGKLGQKIK
3GDO Chain:B ((104-163))----------------------KPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFL--TIKKLISEGSLEDI--


General information:
TITO was launched using:
RESULT:

Template: 3GDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 43 -1030 -23.94 -25.11
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -23.94
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_3GDO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GDO-query.scw
PDB file : Tito_Scwrl_3GDO.pdb: