Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQSNNPILTRVETVSDYSQPMTVQGAIQKSVMLTIIAA-----------AVGVALFFY---------AAFTANVGIAYAASIVGAIGGLVLALI---TTFK---------PTTAPTLAIPYALFEGAFLGGISFTFQLKYPGVPLQALLATFVT----------TLVMF----------GLYKFQIIRATEKFK---SVVISASL------------------AIFIVFIVQMVMRLAFGS----SIPYIFESN--------WLGIGFAAFVAVIASLNLILDF----D-LIETNAAYRAPKFMEWLCGIALLATLVW------MYISFLRLLGLLSDD
4UY5 Chain:A ((2-327))----------TLSLANYLAADSAAEALRRDVRAGLTAAPKSLPPKWFYDAVGSDLFDQITRLPEYYPTRTEAQILRTRSAEIIAAAGADTLVELGSGTSEKTRMLLDAMRDAELLRRFIPFDV-DAGVLRSAGAAIGAEYPGIEIDAVCGDFEEHLGKIPHVGRRLVVFLGSTIGNLTPAPRAEFLSTLADTLQPGDSLLLGTDLVKDTGRLVRAYDDAAGVTAAFNRNVLAVVNRELSADFDLDAFEHVAKWNSDEERIEMWLRARTAQHVRV-AALDLEVDFAAGEEMLTEVSCKFRPENVVAELAEAGLRQTHWWTDPAGDFGLSLAVRLEHHHH-


General information:
TITO was launched using:
RESULT:

Template: 4UY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 950 -58446 -61.52 -254.11
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -61.52
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.175

(partial model without unconserved sides chains):
PDB file : Tito_4UY5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UY5-query.scw
PDB file : Tito_Scwrl_4UY5.pdb: