Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------MQKFMNGWVNGFIGVAIFAGSLPATRVAVTGFEPGFLTAARAVIAGVLGLILIFLLKEKKPAKQDWWPLAIVALGVVVGFPLFTALALQYMNAAHSIVFVSLLPLATA---IFAVVRGGEKPNLFFWIFAVLGSLVVFTYMFFL--SGEASFGIGDLYMLIAIILCGFGYAE-----------GGVLSKKIGGWQVICWALILALPIM---LLATLFYMPVSFQD------------VSTSAVAGLVYVSLFSMLIGFFFWYKGLAQGGIAAISQ---------LQLLQPLMGLAIAALLLHEHVSWSMLMVTAVTILCVAAAKKFA
3DZO Chain:A ((13-382))NLYFQGFRGTDPGDVVIEELFNRIPQANVRTTSEYAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGE------SFEVHVPYFTERAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAM-ETPEYEQLRTELSAALPLYQ


General information:
TITO was launched using:
RESULT:

Template: 3DZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1347 -135452 -100.56 -483.76
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -100.56
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.231

(partial model without unconserved sides chains):
PDB file : Tito_3DZO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DZO-query.scw
PDB file : Tito_Scwrl_3DZO.pdb: