Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKINDFPHDNNFWKVEWIGGVYNDIDGEPRIRIYLAQIKSNIERQKTLYNSSLEVRNQQNISSVHDVKIGLIQFIPIGSVWKNGILDQSFTAQYEQFNFNSDTPSEVCFQSQYGGIAETGLNNTTEWNNHLNDFHYRIVNSEARALGNYINVFYDYNGLSRIYIPSIVILQACYITSPKSARHIIFGQINKLLDPETSGFIDKETFRIHLHRDYKDIEAPMIANLATNFNAKMGLRTLRQSLVKESNITSISTPKRLKISFPFSNDFSIKVKGKYIMENNKIYGFFVTQIIEFSTKFDFTKLVIFRKNSNQKGKEKAENLQNAYEGCNAVRPSHSESLDDKDESQPLIFTHDQVSNQNLPQSIDFPLCSNISNLEVLKEDKDIQYYQNASYTNLNLRPSNTTSTGPAISSNNGVSELQIEPSLPVDLEYFFDVLEILNKLGYQFKSIAVNNSRDHPRGIINQFNRFIKNLHKWHLQDDDQTPRPFIVAEMIYKGAFYYLLDIAPRKGAALSAQLIRAYTGEQITPTAFAILLNDVARTSPKGWSVLDHAKYSQKWQHFRIEHNRNNKPELVAKNIIKKLG
3GN6 Chain:C ((255-286))----------------------------------------------------------------------------------------------------------------------------------------------------------------------STEILRNAHADGG-LRAYIMHGVWESVWDHENS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 44 -1136 -25.81 -35.48
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain C : 0.54

3D Compatibility (PKB) : -25.81
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.122

(partial model without unconserved sides chains):
PDB file : Tito_3GN6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GN6-query.scw
PDB file : Tito_Scwrl_3GN6.pdb: