Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFWQKLFLADQQHNEHKNQTACVENDCSCKTNEQLLSALAQATDEDVIKGIKKVLISRGYSRKELNELTQKTSIH
4DN7 Chain:B ((383-398))------------------------------------------------------YLMARGLTEDEAVGMI------


General information:
TITO was launched using:
RESULT:

Template: 4DN7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 29 -5418 -186.81 -338.59
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : -186.81
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.978

(partial model without unconserved sides chains):
PDB file : Tito_4DN7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DN7-query.scw
PDB file : Tito_Scwrl_4DN7.pdb: