Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence -----------------------------------------------MARNADYIDIAG-FTIAPQTLLPYGHLYNASLAGNQLNSAHGFAGPILAAPIWLINKPER-FFAIAPYLYVPIGTYHSDEALNIDENRWKFDLQLGVFNNVAMIFLPKSRPMLFDMVHMMILLE-------------------------------------------------------------------------------------------------------- 4RL8 Chain:A ((3-269)) EVDPGDYEALPVGATIGVVYYQHSTTDSAYANGHKVSSDFKLTSNVGILRLLHVYQLTDRLTLEPQFLLPFGRV-SSSGDASALGDTSGVGDLTLTAPLKYRLNEANDILGATVYLTAPTGNYNRDDALNLGENRWKVDLQAAYVKHL-------GEKWAVDLVGDAIWYSDNDDFGSSSARREQDVSYGAQLMGRYIVDPGTSLAIGLGHTWGGENQIDGTAQDDRAETTNFRVTANKFFTAKDQLQMQLGRDLAVENGPKENFRLNLRYVRVF

General information: TITO was launched using: RESULT: Template: 4RL8.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 403 -12597 -31.26 -110.50 target 2D structure prediction score : 0.49 Monomeric hydrophicity matching model chain A : 0.65 3D Compatibility (PKB) : -31.26 2D Compatibility (Sec. Struct. Predict.) : 0.49 1D Compatibility (Hydrophobicity) : 0.65 QMean score : 0.077

(partial model without unconserved sides chains): PDB file : Tito_4RL8.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4RL8-query.scw PDB file : Tito_Scwrl_4RL8.pdb: