Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGQQLVFKSKNALTDLTAIPDFVSYKSRVESDGGVIYDQQAVLDVLQFIFQNSIPETDILSATSAAWGVKFDPVTKVITKLYNLFN-PAGDIIIQNGTMNAIHTTEVDGKPSLYAGGTSTLYGYSSGKFAIANPIAHTIHHVPARSGYGASALLFPLQTLFNKEGFDASTDPAKVSTDYVAVDQRLTRNATTNNDPNTWNEAHRFWGASVGVDGNLNGSRIGYASNALTTGTFIYKDGAQSNSNSTVPNIKPTQQADQRLYLMSNFTVAGVRGNYYLGYIFENWLLNNGTDSIAKALSLRAKTKYR
4NN9 Chain:A ((131-230))------------------------------------------------------------------------PVTEINTWARNILRTQESECVCHNGVCPVVFT---DG--SATGPAETRIYYFKEGKILKWEPLAGTAKHIEECSCYGERAEI----TCTCRDNWQGSNRPV-IRIDPVAM----------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4NN9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 424 -2903 -6.85 -29.32
target 2D structure prediction score : 0.33
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -6.85
2D Compatibility (Sec. Struct. Predict.) : 0.33
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.171

(partial model without unconserved sides chains):
PDB file : Tito_4NN9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NN9-query.scw
PDB file : Tito_Scwrl_4NN9.pdb: