Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFMTESRLTHLKQLEAESIHIIREVAAEFENPVMLYSIGKDSAVMLHLALKAFYPAKLPFPLLHVDTGWKFKDMIAFRDNMAKTHGFDLIVHQNKE--G---REA--GINPFDHGSSKYTDIMKTQALKQALDKYQFDAAFGGARRDEEKSRAKERVYSFRDSKHRWDPKNQRPELWNLYNGKVNKGESIRVFPLSNWTELDIWQYIYLENIQIVPLYFSAVRPVVERSGTLIMVDDERMRLKEGEVPQMKSVRFRTLGCYPLTGAVESEADTLPEIIQEMLLATSSERQGRMIDHDEAGSMEKKKQEGYF
4BWV Chain:A ((44-260))------RDARLQHLEAQALETLQKTVENFEKPAFPCALIAGDVVILDLLHRIGAFSDNKVKIIFIDTFHLFPETYKFLSEVEERYGFKAHVFHAADVNNKEAYDAKFGSDLFITDIEEYDRICKVEPFSRALKTLEVDAMINGRRRDHGAERAHLEVFE--------------------------EGKMVKVQPLAYWEFRDCWDYLTKYSLPYHPLHDQ---------------------------------GFPSIGDVQSTIPVPRE-KW--------F-EYAGERSGR-------------------


General information:
TITO was launched using:
RESULT:

Template: 4BWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 950 -22625 -23.82 -107.74
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -23.82
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.450

(partial model without unconserved sides chains):
PDB file : Tito_4BWV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BWV-query.scw
PDB file : Tito_Scwrl_4BWV.pdb: