Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATNYGTGRRKTATARVFLSAGTGKLVINNRTLEQYFGRETARMVVRQPLELLEATEKYDLYITVKGGGIGGQAGAIRHGITRALIAADETLKPVLRQAGFVTRDAREVERKKLGLRKARKRPQFSKR
5NO4 Chain:I ((4-127))----YGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR


General information:
TITO was launched using:
RESULT:

Template: 5NO4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 473 -47201 -99.79 -380.65
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain I : 0.95

3D Compatibility (PKB) : -99.79
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.95
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_5NO4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5NO4-query.scw
PDB file : Tito_Scwrl_5NO4.pdb: