Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRQKNMFLNIFMVLLVLIAASFVI------SLFVSVLSGLLWFAVKVLIPIALII-------W----LVRWIKGNTHRKNYY-
2LN3 Chain:A ((1-83))MGLTRTITSQNKEELLEIALKFISQGLDLEVEFDSTDDKEIEEFERDMEDLAKKTGVQIQKQWQGNKLRIRLKGSLEHHHHHH


General information:
TITO was launched using:
RESULT:

Template: 2LN3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 180 -10430 -57.94 -160.46
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -57.94
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.583

(partial model without unconserved sides chains):
PDB file : Tito_2LN3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LN3-query.scw
PDB file : Tito_Scwrl_2LN3.pdb: