Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKLFSQLWIYFASIVFISILVTLLCFLGFIFLLSRHSISPAESAGKPTLYPLFVFAGFSMVVGTGISIFVGRRILHPISALGTNMSLVATGDFSIRMDEQQKVAEVQQLYKDFHVMVQELNSIETLRNDFVSSVSHEFKTPLATIQGYVQLLQAPNLSDEERQIFLYRIIESITQLSQLTENILKLNKLENQRIQLEKKEYRLDEQIREVIVFFQPKWEKEQLELDIELAAVNYTGNEEF--------LYQVWLNIMDNAIKYNQINGQIHIKLFETATEIVLEVTDSGVGMNEETRDRMFEKFYQGDTSRQISGNGLVTFTG
3A0T Chain:A ((1-115))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEFTEFNLNELIREVYVLFEEKIRKMNIDFCFE------TDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDMYTKVRVSVWNSGPPIPEELKEKIFSPFFT--TKTQGTGLGL-----


General information:
TITO was launched using:
RESULT:

Template: 3A0T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 364 -3596 -9.88 -33.61
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -9.88
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_3A0T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3A0T-query.scw
PDB file : Tito_Scwrl_3A0T.pdb: