Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKAHKNIWNKEKKTMNPLIEELTKEQLRSDIPAFRPGDTVRVHAKVVEGTRERIQLFEGVVIKRRGAGISETYTVRKVSNGVGVERTFPLHTPRVAKIEVVRYGKVRRAKLYYLRALHGKAARIKEIRR
3J8G Chain:P ((1-111))----------------SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKE---


General information:
TITO was launched using:
RESULT:

Template: 3J8G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain P - contact count / total energy / energy per contact / energy per residue : 401 -24463 -61.00 -220.38
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain P : 0.82

3D Compatibility (PKB) : -61.00
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.327

(partial model without unconserved sides chains):
PDB file : Tito_3J8G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J8G-query.scw
PDB file : Tito_Scwrl_3J8G.pdb: