Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLLAMNEYNKCCFAKHAEKGKKYYCRGCRKRVILKKGKKKCAHFAHQKSDNCSVFSERESKEHLQLKECFMDWLGQSVEPVFLEAYLPRLRQRPDILLANLAIEIQCSRLSHQRFIERTQNYLNNSYQVWWILGNSFLGQSQFSLIEKSCCYYNRKRGVHCWKADLKKQKLYLYHHITETVSGHISFCSSCWTFSSRDLKEIFTSNEIKMNQMKKIEKVSEDGKKWLTRQLIHKQKNTVSIQEQCYLRHKHLLHLSSWIYQKSRFFFYLQEQVFLYRMLYEEALENQKVPDFNSWLCQIKEHKREWLFPMIDEEMVYQQFFNECIHLSSLKK
5K2M Chain:F ((20-34))--------------------QIVECPVCGAELEVV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5K2M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 18 -1493 -82.94 -99.53
target 2D structure prediction score : 0.07
Monomeric hydrophicity matching model chain F : 0.54

3D Compatibility (PKB) : -82.94
2D Compatibility (Sec. Struct. Predict.) : 0.07
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.719

(partial model without unconserved sides chains):
PDB file : Tito_5K2M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5K2M-query.scw
PDB file : Tito_Scwrl_5K2M.pdb: