Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVYIDPKHLELEDRVVAINRVTKVVKGGRRLRFAALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLVEVPMVGSTIPHEVIGAFSGGRILMKPAVEGSGVAAGGPVRAVLELAGVADITSKSLGSNTPINVVRATVEGLKQLKRAEEVAELRGKSVEELIG
5NO3 Chain:E ((1-155))---------ELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEEI--


General information:
TITO was launched using:
RESULT:

Template: 5NO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 704 -62710 -89.08 -404.58
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain E : 0.87

3D Compatibility (PKB) : -89.08
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.560

(partial model without unconserved sides chains):
PDB file : Tito_5NO3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5NO3-query.scw
PDB file : Tito_Scwrl_5NO3.pdb: