Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMEEWQSVFEEWFPKEISKSYPIKISKQYTSSQRWEIYAKLTKKQRELVDKHRRYLISSRFMEEHYLAATDWVFSDFKINPFFRTKRSQQKLYCECGRELKVQYIVKSPKTGKILKLGINHFADHLHVSPTVAASIHQGMTKVDLALDELLWLKQKNIDFPEGLWQKYCFVLYQNRRMKQPYLPDIKLAQRLAEFRQVEMPIYIADYQALENEIKKISEH--------INGQSKKRQIKKELFDDFAEELVKDVEEFLINYRAFLRKDWQSIVYEEVPVHPNAYFETFISVLRKTKRQRTPEVTAQMEYFAKNQRFIQPKIYLFIWKQYCRYGFTEGFFDSIPRIVRNGFLKVLRKEREAIQSADKKDRTVSKEKWQLVVKDIQSGNVQETIDKWKGKHYRFTEAQKQALEYYQKLEESLRFNDEARKYLKELL
4UP8 Chain:A ((249-328))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFRNEGIDQTHNP---------EFTTCEFYMAYADY----NDIMKMTEELLGNMVKDITGGSTKLEIKDRLMDINNEEDIKMLEKF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4UP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 60 -3784 -63.07 -58.22
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -63.07
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.328

(partial model without unconserved sides chains):
PDB file : Tito_4UP8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UP8-query.scw
PDB file : Tito_Scwrl_4UP8.pdb: