Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEILIALVPMLAWGSIGLVSGKIGGDANQQTLGMTIGAFLFSLVVFFVVSPVITPWIFLIGFLSGLAWSVGQNGQFHGMKYMGVSVGLPLSTGFQLILNTIAGAVFFHEWTQTKDYVYGIIALALLVSGAYLTARQDDEGKIDTDNKMLDFGKGFRALIFSTIGY--GVYTIIVNWANLDAMSIILPQSIGMILGASFFAFRKVKVDQFVWKNMICGLLWGLGNICMLLTVKSLGLAVGFSLSQMGIIISTLGGIFILGERKTKKELIYVIVGCLLVILGGILLGYMKTV
4QW2 Chain:A ((3-202))EELVVEVR---------------GSN----------GAFYKAFVKDVHEDSITVAF--------ENNWQPDRQIPFHDVRF-------PPPVGYNKDINE-SDEVEVYSRANEKEPCCWWLAKVRMIKGE-----------------------------FYVIEYAACTYNEIVTIERLRSVNPNKPATKD--------TFHKIKLDVPEDLQQMCA---------KEAAHKDFKKAVG---AFSVTYDPENYQLVILSINEVTSKRAHMLIDMHFRSLRTKLSLIMR--


General information:
TITO was launched using:
RESULT:

Template: 4QW2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 845 -71891 -85.08 -366.79
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -85.08
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.271

(partial model without unconserved sides chains):
PDB file : Tito_4QW2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QW2-query.scw
PDB file : Tito_Scwrl_4QW2.pdb: