Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSKQILILAGDGIGPEIVGAAEKVLNKVNEKFNLSLTWEHGLLGGAAIDAHGEPYPAVTSEQAKKADAILLGAVGGPKWDTIERSIRPERGLLKIRSELNLFANLRPAILYPQLADASSLKPEIVAGLDILIVRELTGGIYFGQPRGIRELENGEKQGYNTDVYSESEIKRIAKVAFELAGLRGGKVCSVDKANVLEVTELWKQTVTDLQQANYPNIQLSHMYVDNAAMQLVRAPKQFDVIVTGNLFGDILSDEAAMLTGSIGMLPSASLDENGKGMYEPCHGSAPDIAGQNVANPLATILSVAMMLRYTFREEAAAKAIEDAVGQVLDQGLRTADIMSEGMTKVGTAEMGEAVVAALA 5HN4 Chain:A ((3-277)) ---RVAVIPGDGIGPEVIDGAVRVLKAVTGRVRFEY-YEGGV---DVFQECGSPIREEDLEEIRRSDAVLFGATTTPFDLPGYRSL-----ILTLRKELGLYANLR-------------IIPDLRTGREIVIVRENSEGLYFG----IGAVVNG--RAVDVRLITREGAERIARFAVEQAKARGSFITFVHKANVLTGDKFFRRIVREV--AGEEGVEVRDAIIDSFTIKLVRNPWEHGVILSENLFGDILSDLATVHAGSIGIVPSGNYG-DGIALFEPVHGSAPDIAGKGIANPIGAILSGAMLLDY--------------------------------------------------

General information: TITO was launched using: RESULT: Template: 5HN4.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1500 -174264 -116.18 -633.69 target 2D structure prediction score : 0.63 Monomeric hydrophicity matching model chain A : 0.77 3D Compatibility (PKB) : -116.18 2D Compatibility (Sec. Struct. Predict.) : 0.63 1D Compatibility (Hydrophobicity) : 0.77 QMean score : 0.549

(partial model without unconserved sides chains): PDB file : Tito_5HN4.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5HN4-query.scw PDB file : Tito_Scwrl_5HN4.pdb: